IMPROVE

Contents:

  • What is the IMPROVE project?
    • Background
    • Future Directions
    • Acknowledgments
  • Installation
  • Quickstart
  • Applications
    • Drug Response Prediction
      • Problem Formulation
      • Benchmark Data
      • Models
        • DeepCDR
        • GraphDRP
        • HiDRA
        • tCNNS
        • LGBM
        • Uno
        • DeepTTC
        • IGTD
        • PathDSP
  • IMPROVE API
    • Preprocess
    • Train
    • Infer
    • Utility Functions
    • Creating Model-Specific Parameters
    • Configuration Files
  • Curating Models
    • Curating Steps
    • Templates
      • Preprocessing
      • Training
      • Inference
      • Model Parameters
      • Config File
      • Readme
      • Download Scripts
    • Requirements for Curated Models
  • Using Models with Workflows
    • Running a Single Model
    • Workflows
    • CSA
      • Brute-Force CSA
      • Scaling CSA
      • Swarm CSA
      • Post-process CSA Results
    • HPO
      • Supervisor HPO
      • DeepHyper HPO
    • LCA
      • Generate LCA Splits
      • Brute-Force LCA
      • Swarm LCA
      • Post-process LCA Results
  • Release Notes
    • v0.1.0
    • v0.0.3
    • Branch Naming
  • Publications
  • Contact Us
IMPROVE
  • Search

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